BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BA0AB003E09LP1|AL425139
         (1084 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1619                                                         237   5e-62

>3x_Contig1619 
          Length = 7770

 Score =  237 bits (108), Expect = 5e-62
 Identities = 111/112 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttataatattgataatcataataatctcataaatttataccagccctcatatgttatatg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3045 ttataatattgataatcataataatctcataaatttataccagccctcatatgttatatg 3104

                                                                
Query: 61   agggctggtatatataaataattatatattctatttttatataatacttatt 112
            |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3105 agggctggtatatataaataattatatattctatttttatataataattatt 3156



 Score =  145 bits (66), Expect = 2e-34
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                        
Query: 157  ccckcaaccatgctatggtcgcggggataattataaatattcatctaktaatataatata 216
            ||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 3201 cccgcaaccatgctatggtcgcggggataattataaatattcatctaaaaatataatata 3260

                            
Query: 217  tataatgtaatttata 232
            ||||||||||||||||
Sbjct: 3261 tataatgtaatttata 3276


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.52    0.729     1.42 

Gapped
Lambda     K      H
    1.52    0.729     1.42 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,217
Number of Sequences: 1807
Number of extensions: 16217
Number of successful extensions: 3841
Number of sequences better than 1.0e-20: 1
length of query: 1084
length of database: 10,358,551
effective HSP length: 15
effective length of query: 1069
effective length of database: 10,331,446
effective search space: 11044315774
effective search space used: 11044315774
T: 0
A: 40
X1: 5 (11.0 bits)
X2: 13 (28.5 bits)
S1: 11 (24.6 bits)
S2: 46 (101.2 bits)